Search results for "Plants genetics"
showing 10 items of 45 documents
Genetic determinants of seed protein plasticity in response to the environment in Medicago truncatula
2021
As the frequency of extreme environmental events is expected to increase with climate change, identifying candidate genes for stabilizing the protein composition of legume seeds or optimizing this in a given environment is increasingly important. To elucidate the genetic determinants of seed protein plasticity, major seed proteins from 200 ecotypes of Medicago truncatula grown in four contrasting environments were quantified after one-dimensional electrophoresis. The plasticity index of these proteins was recorded for each genotype as the slope of Finlay and Wilkinson's regression and then used for genome-wide association studies (GWASs), enabling the identification of candidate genes for d…
Ecological plant epigenetics: Evidence from model and non-model species, and the way forward
2017
Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute…
The soursop genome and comparative genomics of basal angiosperms provide new insights on evolutionary incongruence
2019
AbstractDeep relationships and the sequence of divergence among major lineages of angiosperms (magnoliids, monocots and eudicots) remain ambiguous and differ depending on analytical approaches and datasets used. Complete genomes potentially provide opportunities to resolve these uncertainties, but two recently published magnoliid genomes instead deliver further conflicting signals. To disentangle key angiosperm relationships, we report a high-quality draft genome for the soursop (Annona muricata, Annonaceae). We reconstructed phylogenomic trees and show that the soursop represents a genomic mosaic supporting different histories, with scaffolds almost exclusively supporting single topologies…
Nested core collections maximizing genetic diversity in Arabidopsis thaliana.
2004
Summary The successful exploitation of natural genetic diversity requires a basic knowledge of the extent of the variation present in a species. To study natural variation in Arabidopsis thaliana, we defined nested core collections maximizing the diversity present among a worldwide set of 265 accessions. The core collections were generated based on DNA sequence data from a limited number of fragments evenly distributed in the genome and were shown to successfully capture the molecular diversity in other loci as well as the morphological diversity. The core collections are available to the scientific community and thus provide an important resource for the study of genetic variation and its …
Changes in lipid composition in tobacco cells treated with cryptogein , an elicitor from Phytophthora cryptogea
1995
Abstract Changes in lipid composition occurred when tobacco cells (Nicotiana tabacum var. Xanthi) were treated with cryptogein, a proteinaceous elicitor from Phytophthora cryptogea. The most striking change was an increase in acylated steryl glycosides and steryl esters levels, certainly resulting from the glycosylation and/or esterification of free sterols. Moreover, in vivo pulse-labelling experiments with [14C]acetate also showed that a progressive decline in the incorporation rate of [14C]acetate into free sterols started with the induction of sesquiterpenoid synthesis and lasted when sesquiterpenoid synthesis stops. This phenomenon was accompanied by a significant increase in the synth…
Regulation of plant NADPH oxidase.
2007
Addendum to: Regulation of Reactive Oxygen Species Production by a 14-3-3 Protein in Elicited Tobacco Cells. T. Elmayan, J. Fromentin, C. Riondet, G. Alcaraz, J. Blein and F. Simon-Plas. Plant Cell Environ 2007; 30:722–32; International audience; The production of Reactive Oxygen Species (ROS) is one of the key events occurring during the response of plants to environmental changes, and contributing to establish adaptive signaling pathways. A plasma membrane bound NADPH oxidase enzyme has been evidenced as the ROS producing system in various plant‑microorganisms interactions. We very recently reported, that a protein of the 14‑3‑3 family was able to interact directly with the C‑terminus par…
Molecular Bases for Sensitivity to Tubulin-Binding Herbicides in Green Foxtail
2004
Abstract We investigated the molecular bases for resistance to several classes of herbicides that bind tubulins in green foxtail (Setaria viridis L. Beauv.). We identified two α- and two β-tubulin genes in green foxtail. Sequence comparison between resistant and sensitive plants revealed two mutations, a leucine-to-phenylalanine change at position 136 and a threonine-to-isoleucine change at position 239, in the gene encoding α2-tubulin. Association of mutation at position 239 with herbicide resistance was demonstrated using near-isogenic lines derived from interspecific pairings between green foxtail and foxtail millet (Setaria italica L. Beauv.), and herbicide sensitivity bioassays combine…
Evidence for a geranyl-diphosphate synthase located within the plastids of Vitis vinifera L. cultivated in vitro
1992
Intact plastids from cell suspensions of Vitis vinifera L. cv. Muscat de Frontignan, free of detectable contamination by other particles as judged by the distribution of organelle-specific marker enzymes and by electron microscopy, exhibit geranyl-diphosphate synthase activity (EC 2.5.1.1). This synthase activity remains stable after tryptic digestion of unlysed organelles and is enhanced by plastid disruption. We conclude that the enzyme is located within the organelle. The possibility of an isopentenyl diphosphate/dimethylallyl diphosphate translocating system which would play a major role in the regulation of monoterpene metabolism is discussed.
Comparison of the effects of cryptogein and oligogalacturonides on tabacco cells and evidence of different forms of desensitization induced by these …
1998
Abstract The effects of cryptogein and oligogalacturonides (OGs) were compared on tobacco cells by measuring calcium influx and calcium-dependent responses including extracellular alkalinization and H 2 O 2 production. The main difference is the higher calcium influx and the sustained H 2 O 2 production induced by cryptogein compared to OGs. Amplitude and duration of calcium signalling triggered by cryptogein or OGs may explain the necrotic effect of cryptogein, and the absence of necrosis in tobacco plants treated with OGs. We used induction of alkalinization and H 2 O 2 production to investigate cryptogein effects after a first treatment with cryptogein or OGs, and reciprocally. Results s…
Characterization of a proton pump from Acer pseudoplatanus cell microsomes
1985
Abstract An Acer pseudoplatanus cell microsomal fraction was enriched in ATPase by sedimentation through a sucrose cushion and treatment with Triton X-100. This activity, which reached 0.9 μmol P i min −1 mg −1 protein, was specific for ATP, slightly stimulated by K + , inhibited by orthovanadate and diethylstilbestrol, insensitive to oligomycin and azide, and had a K m - value of 0.51 mM for MgATP. ATP-dependent proton translocation was demonstrated by the ΔpH probe acridine orange. This activity had a optimum at pH 6.5, was substrate specific for ATP, and was strongly dependent on K + . Preparations of plasma membrane ATPase from A. pseudoplatanus cell culture thus posses biochemical prop…